Sitemap
A list of all the posts and pages found on the site. For you robots out there, there is an XML version available for digesting as well.
Pages
Posts
portfolio
publications
Context-specific gene regulations in cancer gene expression data
Published in In the proceedings of Biocomputing 2009, 2009
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Recommended citation: Ina Sen, Michael Verdicchio, Sungwon Jung, Robert Trevino, Michael Bittner, Seungchan Kim, "Context-specific gene regulations in cancer gene expression data." In the proceedings of Biocomputing 2009, 2009.
Planning interventions in biological networks
Published in ACM Transactions on Intelligent Systems and Technology (TIST), 2010
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Recommended citation: Daniel Bryce, Michael Verdicchio, Seungchan Kim, "Planning interventions in biological networks." ACM Transactions on Intelligent Systems and Technology (TIST), 2010.
Identifying targets for intervention by analyzing basins of attraction
Published in In the proceedings of Biocomputing 2011, 2011
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Recommended citation: Michael Verdicchio, Seungchan Kim, "Identifying targets for intervention by analyzing basins of attraction." In the proceedings of Biocomputing 2011, 2011.
Learning Contextual Gene Set Interaction Networks of Glioblastoma and Identifying Subtype Specificity
Published in In the proceedings of Eighth International Workshop on Computational Systems Biology (WCSB 2011), 2011
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Recommended citation: Sungwon Jung, Michael Verdicchio, Jeff Kiefer, Michael Berens, Seungchan Kim, "Learning Contextual Gene Set Interaction Networks of Glioblastoma and Identifying Subtype Specificity." In the proceedings of Eighth International Workshop on Computational Systems Biology (WCSB 2011), 2011.
Learning contextual gene set interaction networks of cancer with condition specificity
Published in BMC genomics, 2013
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Recommended citation: Sungwon Jung, Michael Verdicchio, Jeff Kiefer, Daniel Hoff, Michael Berens, Michael Bittner, Seungchan Kim, "Learning contextual gene set interaction networks of cancer with condition specificity." BMC genomics, 2013.
Template-based intervention in Boolean network models of biological systems
Published in EURASIP Journal on Bioinformatics and Systems Biology, 2014
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Recommended citation: Michael Verdicchio, Seungchan Kim, "Template-based intervention in Boolean network models of biological systems." EURASIP Journal on Bioinformatics and Systems Biology, 2014.
Embedding cybersecurity in the second programming course (CS2)
Published in In the proceedings of Journal of Computing Sciences in Colleges, 2016
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Recommended citation: Michael Verdicchio, Deepti Joshi, Shankar Banik, "Embedding cybersecurity in the second programming course (CS2)." In the proceedings of Journal of Computing Sciences in Colleges, 2016.
Explorations in Computer Science, 3rd. Ed.
Published in Explorations in Computer Science, 3rd. Ed., 2016
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Recommended citation: R.M. Meyer, M. Verdicchio, "Explorations in Computer Science, 3rd. Ed.." Explorations in Computer Science, 3rd. Ed., 2016.
Multicast Routing using Delay Intervals for Collaborative and Competitive Applications
Published in IEEE Transactions on Communications, 2018
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Recommended citation: James Andrus, Shankar Banik, Breeanne Swart, Michael Verdicchio, "Multicast Routing using Delay Intervals for Collaborative and Competitive Applications." IEEE Transactions on Communications, 2018.
Students' Perception of a Summer Undergraduate Research Experience: Across the Disciplines
Published in In the proceedings of ASEE Annual Conference & Exposition, 2018
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Recommended citation: S. Ghanat, D. Garner, J. Howison, R. Hunter, B. Baker, S. Banik, M. Verdicchio, N. Washuta, "Students' Perception of a Summer Undergraduate Research Experience: Across the Disciplines." In the proceedings of ASEE Annual Conference & Exposition, 2018.
Hurricanes and pandemics: An experience report on adapting software engineering courses to ensure continuity of instruction
Published in In the proceedings of Journal of Computing Sciences in Colleges, 2021
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Recommended citation: Michael Verdicchio, "Hurricanes and pandemics: An experience report on adapting software engineering courses to ensure continuity of instruction." In the proceedings of Journal of Computing Sciences in Colleges, 2021.
Generating Multi-Part Autogradable Faded Parsons Problems From Code-Writing Exercises
Published in In the proceedings of Proceedings of the 55th ACM Technical Symposium on Computer Science Education V. 1, 2024
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Recommended citation: Serena Caraco, Nelson Lojo, Michael Verdicchio, Armando Fox, "Generating Multi-Part Autogradable Faded Parsons Problems From Code-Writing Exercises." In the proceedings of Proceedings of the 55th ACM Technical Symposium on Computer Science Education V. 1, 2024.
Adapting Program Assessment for the Age of Generative AI
Published in In the proceedings of 2025 IEEE Engineering Education World Conference (EDUNINE), 2025
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Recommended citation: Michael Verdicchio, "Adapting Program Assessment for the Age of Generative AI." In the proceedings of 2025 IEEE Engineering Education World Conference (EDUNINE), 2025.
talks
Learning Causal Relationships between Genes from Steady State Data: Algorithms, Simulation and Application
Published:
Poster presentation of a peer-reviewed abstract
An Interactive Environment for Visualizing, Interpreting, and Revising Biological Process Models
Published:
Poster presentation of a peer-reviewed abstract
Boolean Network Models of Human Aging
Published:
Poster presentation of a peer-reviewed abstract
Boolean Network Models of Human Aging
Published:
Oral presentation of a peer-reviewed abstract
Reverse Engineering and Synthesis of Biomolecular Systems
Published:
Joint presentation of session introduction with Prof. Gil Alterovitz
Identifying targets for intervention by analyzing basins of attraction
Published:
Poster presentation of a peer-reviewed abstract
Template-Based Intervention in Boolean Network Models of Biological Systems
Published:
Poster presentation of a peer-reviewed abstract
Hurricanes and pandemics: An experience report on adapting software engineering courses to ensure continuity of instruction
Published:
Virtual presentation of conference paper (Covid)
Effective pedagogical practices in the computer science classroom
Published:
Panel member with Professors Healy, Digh, and Gabbert
Creating a DevOps course
Published:
Poster presentation of a peer-reviewed abstract
The Impact of AI Tools on Assessment Data
Published:
Oral presentation of a peer-reviewed abstract
Adapting program assessment for the age of generative AI
Published:
Virtual presentation of conference paper to Montevideo, Uraguay
teaching
Teaching at Arizona State University
Undergraduate courses, Arizona State University, School of Computing and Augmented Intelligence, 2011
At Arizona State University, I taught multiple sections of the following courses while a PhD student.
- CSE 182 Applied Problem Solving with C#.NET
- CSE 110 Principles of Programming with Java
Teaching at The Citadel
Undergraduate and graduate courses, The Citadel, Department of Cyber and Computer Sciences, 2025
At The Citadel, I have taught many sections of the following courses since 2011.
- CSCI 103 Survey of Computer Science
- CSCI 110 Microcomputer Applications
- CSCI 201 Intro to Computer Science I
- CSCI 202 Intro to Computer Science II
- CSCI 205 Intro to Programming W/ Python
- CSCI 210 Intro to Information Systems
- CSCI 211 Intro to Comp Science I Lab
- CSCI 223 Data Structures and Algorithms
- CSCI 290 Intro to Information Systems
- CSCI 305 Computer Organization Programming
- CSCI 355 Programming Languages
- CSCI 399 Junior Research Project
- CSCI 420 Software Engineering
- CSCI 421 Software Engineering Practicum
- CSCI 491 Internship in Computer Science
- CSCI 495 Senior Seminar
- CSCI 499 Senior Research Project
- CSCI 602 Foundations of Software Engineering
- CSCI 636 IT Policy Strategy Governance
- CSCI 654 Software Requirements Analysis
- CSCI 658 Software Testing Maintenance
- CSCI 690 Special Topics: Software Deployment and Operations
- CSCI 691 Independent Study
- HONR 400 Honors Research Project I
- LDRS 411 Sr Leadership Integration Seminar